How to cite Bioschemas
To cite Bioschemas please use the website URL, https://bioschemas.org and
"Gray, A.J.G, Goble, C.A. and Jimenez, R., 2017. Bioschemas: From Potato Salad to Protein Annotation. In International Semantic Web Conference (Posters, Demos & Industry Tracks)."
Publications and Talks
A list of publications and talks in which Bioschemas was presented:
- [2025] 4th BioHackathon Germany Phil Reed, Nick Juty, Petra Steiner, Leyla Jael Castro,Charles Tapley Hoyt, Oliver Knodel, Martin Voigt, Roman Baum, Dilfuza Djamalova, Jacobo Miranda, and Alban Gaignard. On the path to machine-actionable training materials (Slides or paper)
- [2025] ISMB/ECCB 2025 Nick Juty, Phil Reed, Helena Schnitzer, et al. Applications of Bioschemas in FAIR, AI and knowledge representation (Slides or paper)
- [2025] ELIXIR All Hands Meeting 2025 Phil Reed, Nick Juty, Helena Schnitzel, Leyla J. Castro, Alban Gaignard, and Carole Goble. The 10-year evolution of Bioschemas to immortality (Slides or paper)
- [2025] BioHackrXiv Phil Reed, Helena Schnitzel, and Nick Juty. BioHackEU24 report: Bioschemas for Mortals (Slides or paper)
- [2024] BioHackrXiv Arend D, Conte AD, Feser M, Gadiya Y, Gaignard A, Castro LJ, et al. Bioschemas Resource Index for Chem and Plants (Slides or paper)
- [2024] BioHackrXiv Soiland-Reyes S, Castro LJ, Ravinder R, Weiland C, Grieb J, Rogers A, et al. BioHackEU23 report: Enabling FAIR Digital Objects with RO-Crate, Signposting and Bioschemas (Slides or paper)
- [2023] ACS Fall 2023 Egon Willighagen. Improving findability on chemical resources with Bioschemas (Slides or paper)
- [2023] 1st Conference on Research Data Infrastructure Castro LJ, Fluck J, Arend D, Lange M, Martini D, Neumann S, et al. Schema.org as a Lightweight Harmonization Approach for NFDI (Slides or paper)
- [2023] Proceedings of the Conference on Research Data Infrastructure Castro LJ, Fluck J, Arend D, Lange M, Martini D, Neumann S, et al. Schema.org as a Lightweight Harmonization Approach for NFDI (Slides or paper)
- [2023] 1st Conference on Research Data Infrastructure Neumann S, Bach F, Castro L, Fischer TG, Hofmann S, Huang P-C, et al. Harmonising, Harvesting, and Searching Metadata across a Repository Federation (Slides or paper)
- [2023] Proceedings of the Conference on Research Data Infrastructure Neumann S, Bach F, Castro LJ, Fischer T, Hofmann S, Huang P-C, et al. Harmonising, Harvesting, and Searching Metadata Across a Repository Federation (Slides or paper)
- [2023] BioHackrXiv Rosinach NQ, Alshaikhdeeb B, Bolzani L, Shoaib M, Barbero MC, Aguiló-Castillo S, et al. Infrastructure for synthetic health data (Slides or paper)
- [2023] Open Science Festival Cologne 2023 Castro LJ, Gaignard A, Goble C, Micetic I, Tsueng G, Wu C, et al. Bioschemas for Life Sciences and for all - introducing schemas.science (Slides or paper)
- [2023] Data exchange with RO-Crates and Knowledge Graphs at Open Science Festival Cologne 2023, 05 and 06 July 2023 Soiland-Reyes S, Castro LJ, Rebholz-Schuhmann D. Data exchange with RO-Crates and Knowledge Graphs (Slides or paper)
- [2023] ZB MED maSMP workshop 2023, 2023-06-27 Giraldo O, Cardoso J, Martin del Pico E, Gaignard A, Geist L, Grossmann YV, et al. Workshop machine-actionable Software Management Plans (Slides or paper)
- [2023] PLOS Computational Biology, 2023-06-15 Castro LJ, Palagi PM, Beard N, Attwood TK, Brazas MD. Bioschemas training profiles: A set of specifications for standardizing training information to facilitate the discovery of training programs and resources (Slides or paper)
- [2023] Building lightweight FAIR data packages with Bioschemas and RO-Crate at ELIXIR All Hands 2023, 06 to 08 June 2023 Soiland-Reyes S, Castro LJ, Queralt Rosinach, N. Building lightweight FAIR data packages with Bioschemas and RO-Crate (Slides or paper)
- [2023] BioHackrXiv Tsueng G, Frika S, Gray AJG, Barbero MC, Gaignard A, Micetic I, et al. Enabling profile updates through the Data Discovery Engine (DDE) (Slides or paper)
- [2023] Elixir Tools platform, F2F meeting, 2023-03-28 Alban Gaignard. (more) Findable bioinformatics softwares with Bioschemas (Slides or paper)
- [2023] Artificial Intelligence for Science Gray A, Castro LJ, Juty N, Goble C. Chapter 27: Schema.org for Scientific Data (Slides or paper)
- [2022] BioHackrXiv Ammar, Ammar, Ivan Mičetić, and Alasdair J. G. Gray. An ETL Pipeline to Construct the Intrinsically Disordered Proteins Knowledge Graph (IDP-KG) Using Bioschemas JSON-LD Data Dumps (Slides or paper)
- [2022] , 2022-03-25 Gray, Alasdair J. G., Petros Papadopoulos, Alban Gaignard, Thomas Rosnet, Ivan Mičetić, and Sébastien Moretti. Bioschemas Data Harvesting Project Report (Slides or paper)
- [2022] NFDI4Biodiversity All Hands Conference, Workshop on Data Standards & Common Language, 12-14 October 2022 Franck Michel. Bioschemas: Marking up biodiversity websites to improve data discovery and web-scale integration (Slides or paper)
- [2022] Ontologies for Chemistry, NFDI4Chem Workshop, 7-8 September 2022 Alasdair Gray. (Bio)schemas: Making data resources more Interoperable and Discoverable on the Web (Slides or paper)
- [2022] Research Data Management Workshop @ ELIXIR All Hands 2022, 8 June 2022 Susanna A Sansone. Contributing to EOSC Research Graphs: the role of FAIRsharing and Bioschemas (Slides or paper)
- [2022] Webinar@NFDI.de: (Bio)schemas – Making (not only life science) data resources more interoperable and discoverable on the Web, 4 April 2022 Alasdair Gray. (Bio)schemas – Making (not only life science) data resources more interoperable and discoverable on the Web (Slides or paper)
- [2022] IDP Function and Interoperability, 26 January 2022 Alasdair Gray. Bioschemas for the IDP Community (Slides or paper)
- [2021] BioHackrXiv Gray, Alasdair J. G., Petros Papadopoulos, Ivan Mičetić, and András Hatos. Exploiting Bioschemas Markup to Populate Idpcentral (Slides or paper)
- [2021] ELIXIR Data-Interoperability Face-to-Face Hybrid Meeting, 23-25 November 2021 Alasdair Gray. Global Bioschemas: Community Update (Slides or paper)
- [2021] Metadata for Data Indexing and Data Discovery in Materials Science and Engineering, 18th RDA Plenary Meeting, 9 November 2021 Alasdair Gray. Bioschemas: Improving the Findability of Life Sciences Resources using Schema.org (Slides or paper)
- [2021] Bioschemas: marking up biodiversity websites to improve data discovery and web-scale integration, 10 March 2021 Franck Michel. Bioschemas: marking up biodiversity websites to improve data discovery and web-scale integration (Slides or paper)
- [2020] , Sebastian Böcker, Corey Broeckling, Emma Schymanski, and Nicola Zamboni (Eds). Computational Metabolomics: From Cheminformatics to Machine Learning (Slides or paper)
- [2020] TDWG 2020 Franck Michel. Unleash the Potential of your Website! 180 000 webpages from the French NHM marked up with Bioschemas/Schema.org biodiversity types (Slides or paper)
- [2020] Elixir Webinar Alasdair Gray. ELIXIR Webinar (Slides or paper)
- [2020] , Alasdair Gray. Exploiting Bioschemas Markup to Support ELIXIR Communities (Slides or paper)
- [2020] , Alasdair Gray. Discovering Biodiversity Resources on the Web (Slides or paper)
- [2020] ELIXIR All Hands Meeting 2020 Alasdair Gray. eDGAR and PhenPath resources join the Bioschemas Community (Slides or paper)
- [2020] ELIXIR All Hands Meeting 2020 Alasdair Gray. Bioschemas: Improving Discoverability for Life Sciences Resources (Slides or paper)
- [2020] Synthesys+ NA4 Alasdair Gray. Bioschemas: Improving Discoverability for Life Sciences Resources (Slides or paper)
- [2020] BioHackathon, 2020 Garcia Castro, L. J., Bolleman, J., Dumontier, M., Jupp, S., Labra-Gayo, J. E., Liener, T., Ohta, T., Queralt-Rosinach, N., and Wu, C. Data validation and schema interoperability (Slides or paper)
- [2019] , Alasdair Gray. Bioschemas: Improving discoverability for Life Sciences resources for the Intrinsically disordered proteins community (Slides or paper)
- [2019] , Alasdair Gray & Kenneth McLeod. Make your Web resources more discoverable with Bioschemas markup (Slides or paper)
- [2019] , Kenneth McLeod. Bioschemas: Generating and scraping markup (Slides or paper)
- [2019] , Daniela Butano. ELIXIR: Applying FAIR to InterMine (Slides or paper)
- [2019] , Garcia, L., Giraldo, O., Garcia, A., and Rebholz-Schuhmann, D.. Biotea-2-Bioschemas, facilitating structured markup for semantically annotated scholarly publications (Slides or paper)
- [2019] , Alasdair J G Gray. Bioschemas: Improving Discoverability for Life Sciences Resources (Slides or paper)
- [2019] , Alasdair J G Gray. ELIXIR-UK All Hands Meeting 2019 (Slides or paper)
- [2018] , Carole Goble. Symposium: The Future of a Data-Driven Society (Slides or paper)
- [2018] , Alasdair J. G. Gray & The Bioschemas Community. Bioschemas community: Developing profiles over schema.org to make life sciences resources more findable (Slides or paper)
- [2018] , K. Joeri van der Velde, Bart Charbon, Mark de Haan, Gert-Jan van de Geijn, Mateusz Kuzak & Morris A. Swertz. Implementation of Bioschemas for multiple patient registries (Slides or paper)
- [2018] , Carole Goble. ELIXIR All Hands (Slides or paper)
- [2018] , Alasdair Gray. ELIXIR All Hands (Slides or paper)
- [2018] , Carole Goble. Better software, better service, better research The Software Sustainability Institute, ELIXIR and you (Slides or paper)
- [2018] , Justin Clark-Casey. FAIR Life Sciences Markup for the Web (Slides or paper)
- [2018] , Franck Michel & The Bioschemas Community. Bioschemas & Schema.org: a Lightweight Semantic Layer for Life Sciences Websites (Slides or paper)
- [2018] , Giuseppe Profiti, Rafael Jimenez, Federico Zambelli et al.. Using community events to increase quality and adoption of standards: the case of Bioschemas (Slides or paper)
- [2017] Bioschemas for Datasets - ELIXIR All Hands Meeting, 23 March 2017 Rafael C Jimenez. Presentation
- [2017] Bio-Ontologies ISMB Community of Special Interest Workshop, 24-25 July 2017 Leyla Castro. Poster
- [2017] Intelligent Systems for Molecular Biology (ISMB/BOSC) 2017, 21-25 July 2017 Carole Goble, Niall Beard, Alasdair Gray, Rafael Jimenez, Norman Morrison, Giuseppe Profiti & The Bioschemas Community. Bioschema.org
- [2017] Intelligent Systems for Molecular Biology (ISMB/BOSC) 2017, 21-25 July 2017 Carole Goble, Alasdair J. G. Gray, Rafael Jimenez, Niall Beard, Giuseppe Profiti, Norman Morrison & The Bioschemas Community. Bioschemas.org (Slides or paper)
- [2017] Open Science Fair 2017, 6-8 September 2017 Carole Goble, Alasdair J. G. Gray, Rafael Jimenez, Niall Beard, Norman Morrison, & The Bioschemas Community. Bioschemas.org (Slides or paper)
- [2017] EOSCpilot data interoperability technical workshop, 4-5 October 2017 Leyla Jael Garcia astro, Sarala Wimalaratne & Alasdair Gray. Tutorial
- [2017] EOSCpilot data interoperability technical workshop, 4-5 October 2017 Alasdair Gray, Carole Goble & Rafael C. Jimenez. Overview presentation
- [2017] ISWC 2017 Poster Proceedings, 21-25 October 2017 Alasdair J. G. Gray, Carole Goble, Rafael C. Jimenez & The Bioschemas Community. Bioschemas: From potato salad to protein annotation (Slides or paper)
- [2017] , Carole Goble. FAIR Principles practices supporting recognition (Slides or paper)
- [2017] , Alasdair J. G. Gray. ELIXIR All Hands (Slides or paper)
- [2017] , Carole Goble. Research Objects: more than the sum of the parts (Slides or paper)
- [2017] , Leyla J. Castro, Olga X. Giraldo, Alexander Garcia, Michel Dumontier & The Bioschemas Community. Bioschemas: schema.org for the life sciences (Slides or paper)
- [2017] , Carole Goble. FAIRy stories for Christmas (Slides or paper)
- [2017] , Pete McQuilton. Japanese National Bioscience Database Center - seminar (Slides or paper)
- [2016] NSF Workshop Data and Software Citation, 6-7 June 2016 Carole Goble. FAIR Software (and Data) Citation
- [2016] International Semantic Web Conference (ISWC 2016), October 2016 Carole Goble, Dan Brickley, Natasha Noy, Rafael Jimenez. Bioschemas: Finding and Citing life science data using Schema.org
Please help us keep this list up to date: Join the community and/or create a pull request on the Bioschemas GitHub community project.