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Live Deploys

Below we list the sites that use Bioschemas markup to describe what they are offering. We provide a direct link to the site, an example deployment page, a link to test the markup syntax using the Schema.org Markup Validation tool (SMV), and also a link to the results of using the Bioschemas Markup Scraper and Extractor tool (BMUSE). The links to the Schema.org Markup Validation tool and BMUSE show one example page from the site; however, many more may exist.

Note that when using the Schema.org Markup Validator, you may encounter some error warnings for types and properties. These should correspond to the types and properties that are being proposed by Bioschemas as extensions to the Schema.org vocabulary.

If your Bioschemas compliant site is not listed below, please add it to our list of live deploys and create a pull request to have your site added. Alternatively, email us with details of your site at enquiries@bioschemas.org.

Sites Implementing Bioschemas's Markup

  • 70 sites with Bioschemas markup
  • 131 profile deployments

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.5)

Provides MGI, FlyBase, RGD, WormBase, SGD and Zfin. Release 2.2.0 contains 276,945 Gene records.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: DK, FR, ES

Implemented Profiles

ComputationalTool (v0.4-DRAFT)

17,090 tools

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Description: A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules

Implemented Profiles

Dataset (v0.3-RELEASE)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Sample (v0.1)

Over 16 million samples

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK, BE, CH, EBI, ES, FR, Hub, IT, NL, NO, PT, SE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.4-DRAFT)

23 identifier mapping databases for genes, proteins, complexes, metabolites, and more

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: NL

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: PT

Implemented Profiles

Gene (v0.7)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Description: DisProt is a database of intrinsically disordered proteins. Disordered regions are manually curated from literature. DisProt annotations cover both structural and functional aspects of disorder detected by specific experimental methods. Annotation concepts and detection methods are encoded in the Disorder Ontology.
  • Sitemap: https://disprot.org/sitemap.xml
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2-DRAFT)

1.6k data records

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

1.6k proteins

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinAnnotation (v0.5-DRAFT)

3.5k protein regions

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
SequenceRange (v0.1-DRAFT)

3.5k protein regions

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)

3,658 genes

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

Over 5,300 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Study (v0.1)

Over 3,700 studies

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: Hub

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: PT

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Event (v0.1)

Over 12,000 events

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

DataCatalog (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: CH

Implemented Profiles

Dataset (v0.1)

4450 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.7-DRAFT)

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
TaxonName (v0.1-DRAFT)

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: EBI

Implemented Profiles

Protein (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinAnnotation (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinStructure (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)

Over 44,000 genes

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Description: hPSCreg offers the research community, legislators, regulators and the general public at large an in-depth overview on the current status of human pluripotent stem cell (hPSC) research.
  • Sitemap: https://hpscreg.eu/sitemap.xml

Implemented Profiles

BioSample (v0.1-DRAFT)

Over 3,500 cell lines

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: SE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: RIR
  • Nodes: EBI

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: LU

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.4-DRAFT)

Over 200 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.5)

2,035 compounds

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.2-DRAFT)

Over 9,800 ligands

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

Proteins associated with COVID-19

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: FR

Implemented Profiles

Taxon (v0.7-DRAFT)

180,000+ species have been annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
TaxonName (v0.1-DRAFT)

180,000+ species have been annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: RIR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.1)

Over 150,000 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: FR

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Disease (v0.1-DRAFT)

Over 6,000 diseases

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

71 Datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

653 datasets as of May 2020

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Protein (v0.1)

Over 215,000 proteins

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinStructure (v0.1)

Over 175,000 protein structures

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: BE

Implemented Profiles

Study (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Description: Scholia is a service that creates visual scholarly profiles for topic, people, organizations, species, chemicals, etc using bibliographic and other information in Wikidata.

Implemented Profiles

Gene (v0.7)

Over 40,000 genes.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.5)

More than 1.2M pages annotated with chemical compounds. Live statistics from https://scholia.toolforge.org/chemical/.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

More than 100,000 proteins.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)

More than 2.9M pages annotated with Taxon.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: CH

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.9-DRAFT)

25 million+ protein networks

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)

12 Datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK

Implemented Profiles

BioChemEntity (v0.7-RC)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Keywords: CDR
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

Implemented Profiles

Dataset (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
  • Nodes: UK

Implemented Profiles

ComputationalWorkflow (v1.0-RELEASE)

Over 100 workflows

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
FormalParameter (v1.0-RELEASE)

Over 100 workflows

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Person (v0.2-DRAFT)

Over 100 people

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Name Profile Version Page Structured Data Testing Tool Rich Snippet Tool
https://synbiohub.org/public/igem/BBa_K165005/1
0.7-RC
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https://hpscreg.eu/cell-line/BCRTi001-A

Over 3,500 cell lines

0.1-DRAFT
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https://nanocommons.github.io/specifications/jrc/
0.4
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https://bar.biocomp.unibo.it/bar3/
0.1
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https://bio.tools/covidmine

17,090 tools

0.4-DRAFT
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http://159.149.160.88/cscan
0.1
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http://159.149.160.88/pscan/
0.1
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http://159.149.160.88/pscan_chip_dev/
0.1
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https://swissmodel.expasy.org/
0.1
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https://workflowhub.eu/workflows/18

Over 100 workflows

1.0-RELEASE
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https://aip.fipapatients.org/
0.1
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https://www.ebi.ac.uk/biosamples/
0.1
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http://www.cathdb.info
0.1
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https://www.chd7.org/
0.1
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https://www.covid19dataportal.org/
0.3
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https://deb-central.org/
0.1
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https://www.disprot.org/
0.3
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http://edgar.biocomp.unibo.it/
0.3
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https://ega-archive.org/
0.3
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https://www.ensembl.org/
0.2
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https://fairsharing.org/
0.1
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http://gigadb.org/site/index
0.1
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https://hamap.expasy.org/archaea.html
0.1
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https://www.genenames.org/#data-catalog
0.3
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https://www.proteinatlas.org/
0.1
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https://identifiers.org/
0.1
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https://datacatalog.elixir-luxembourg.org/
0.3
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http://mvid-central.org/
0.1
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https://ippidb.pasteur.fr/
0.3
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http://itsonedb.cloud.ba.infn.it/
0.2
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https://www.guidetopharmacology.org/
0.3
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http://mobidb.bio.unipd.it/
0.1
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https://modelarchive.org/
0.1
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https://nanocommons.github.io/datasets/
0.3
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https://pairedomicsdata.bioinformatics.nl/
0.3
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https://pcddb.cryst.bbk.ac.uk/
0.3
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http://phenpath.biocomp.unibo.it/phenpath/
0.3
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https://string-db.org/
0.3
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https://swissmodel.expasy.org/repository
0.1
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https://synbiohub.org/
0.3
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https://mint.bio.uniroma2.it/
0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://workflowhub.eu/
0.3
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https://www.disprot.org/DP00086#DR

1.6k data records

0.2-DRAFT
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https://www.ensembl.org/id/ENSG00000139618
0.2
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https://synbiohub.org/public/igem/BBa_K165005/1
0.2-DRAFT
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https://aip.fipapatients.org/
0.1
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https://www.alliancegenome.org/gene/RGD:620474
0.1
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https://bmrb.io/data_library/summary/index.php?bmrbId=30309
0.3-RELEASE
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https://bridgedb.github.io/data/gene_database/

23 identifier mapping databases for genes, proteins, complexes, metabolites, and more

0.4-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
http://www.cathdb.info
0.1
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https://www.chd7.org/
0.1
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https://www.ebi.ac.uk/chembl/
0.2
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https://cancer.sanger.ac.uk/cosmic/
0.2
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https://www.covid19dataportal.org/
0.3
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Retrieve using Bioschemas Scraping service BMUSE
https://datamed.org/display-item.php?repository=0006&id=59139ef65152c62a9fc18ff7
0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://deb-central.org/
0.1
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https://www.disprot.org/
0.3
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http://edgar.biocomp.unibo.it/
0.3
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https://ega-archive.org/datasets/EGAD00000000001

Over 5,300 datasets

0.3
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https://www.ensembl.org/
0.2
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https://enzyme.expasy.org/EC/1.1.3.-

4450 datasets

0.1
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https://fairsharing.org/
0.1
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https://flymine.org/
0.3
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https://www.gbif.org/dataset/c0cc29de-f49f-4b66-b4ec-c83afbb7101d
0.2
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https://hamap.expasy.org/cgi-bin/unirule/unirule_browse.cgi
0.1
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https://www.genenames.org/data/gene-symbol-report/#data-set
0.3
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Retrieve using Bioschemas Scraping service BMUSE
https://humanmine.org/
0.3
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https://datacatalog.elixir-luxembourg.org/e/dataset/924dfe7a-71e8-11eb-bafe-3e22fbb3883f

Over 200 datasets

0.4-DRAFT
View example page Page
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Retrieve using Bioschemas Scraping service BMUSE
http://mvid-central.org/
0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://ippidb.pasteur.fr/
0.3
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Retrieve using Bioschemas Scraping service BMUSE
http://itsonedb.cloud.ba.infn.it/
0.2
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https://www.guidetopharmacology.org/
0.3
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https://massbank.eu/MassBank/RecordDisplay?id=LQB00001&dsn=RIKEN_IMS
0.3
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Retrieve using Bioschemas Scraping service BMUSE
http://mobidb.bio.unipd.it/
0.2
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https://nanocommons.github.io/datasets/
0.4-DRAFT
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https://www.omicsdi.org/#/dataset/arrayexpress-repository/E-MTAB-6848

Over 150,000 datasets

0.1
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https://www.opalesurfcasting.net/connaissances/faune-et-flore/le-saumon-de-l-atlantique-salmo-salar.html
0.3
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Retrieve using Bioschemas Scraping service BMUSE
https://pairedomicsdata.bioinformatics.nl/projects/d0f1add5-5b16-4f78-9b93-0d1d9c9bcb59.1

71 Datasets

0.3
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https://pcddb.cryst.bbk.ac.uk/deposit/CD0000031000

653 datasets as of May 2020

0.3
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Retrieve using Bioschemas Scraping service BMUSE
http://phenpath.biocomp.unibo.it/cgi-bin/phenpath/ppDB.py
0.3
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Retrieve using Bioschemas Scraping service BMUSE
https://prosite.expasy.org
0.1
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https://reactome.org/content/detail/R-HSA-449147
0.1
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https://swissmodel.expasy.org/repository

12 Datasets

0.2
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https://synbiohub.org/
0.3
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https://mint.bio.uniroma2.it/
0.1
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https://www.uniprot.org/uniprot/
0.3
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https://wikipathways.org/
0.4-DRAFT
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https://www.orpha.net/consor/cgi-bin/OC_Exp.php?Expert=141189&lng=en

Over 6,000 diseases

0.1-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/courses/q-exactive.aspx
0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://www.elixir-europe.org/events/biohackathon-2018-paris
0.1
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http://elixir-portugal.org/event/embo-practical-course-tree-building-advanced-concepts-and-practice-phylogenetic-analysis
0.1
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https://tess.elixir-europe.org/events

Over 12,000 events

0.1
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https://www.france-bioinformatique.fr/en/evenements_upcoming
0.1
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https://galaxyproject.org/events/
0.1
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https://www.sib.swiss/training/upcoming-training-events
0.1
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https://workflowhub.eu/workflows/18

Over 100 workflows

1.0-RELEASE
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Retrieve using Bioschemas Scraping service BMUSE
https://www.alliancegenome.org/gene/MGI:2442292

Provides MGI, FlyBase, RGD, WormBase, SGD and Zfin. Release 2.2.0 contains 276,945 Gene records.

0.5
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Retrieve using Bioschemas Scraping service BMUSE
https://corkoakdb.org/gene/13014
0.7
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http://edgar.biocomp.unibo.it/cgi-bin/gene_disease_db/gene.py?gene=A2M

3,658 genes

0.7
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ensembl.org/id/ENSG00000139618
0.7
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https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:37133

Over 44,000 genes

0.7
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Retrieve using Bioschemas Scraping service BMUSE
https://scholia.toolforge.org/gene/Q18030793

Over 40,000 genes.

0.7
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/chembl/compound_report_card/CHEMBL59/
0.2-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://ippidb.pasteur.fr/compounds/1103#compound

2,035 compounds

0.5
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Retrieve using Bioschemas Scraping service BMUSE
https://www.guidetopharmacology.org/GRAC/LigandDisplayForward?ligandId=8299

Over 9,800 ligands

0.2-DRAFT
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https://massbank.eu/MassBank/RecordDisplay?id=LQB00001&dsn=RIKEN_IMS
0.5
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Retrieve using Bioschemas Scraping service BMUSE
https://scholia.toolforge.org/chemical/Q18216

More than 1.2M pages annotated with chemical compounds. Live statistics from https://scholia.toolforge.org/chemical/.

0.5
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Retrieve using Bioschemas Scraping service BMUSE
https://workflowhub.eu/people/9

Over 100 people

0.2-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://www.disprot.org/DP00086

1.6k proteins

0.11
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/Tools/hmmer/search/phmmer

Result of searches are annotated (results last 1 week)

0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://www.guidetopharmacology.org/coronavirus.jsp

Proteins associated with COVID-19

0.11
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/pdbe/entry/pdb/5hbi/protein/1

Over 215,000 proteins

0.1
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https://scholia.toolforge.org/protein/Q424728

More than 100,000 proteins.

0.11
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https://string-db.org/network/9606.ENSP00000379258

25 million+ protein networks

0.9-DRAFT
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https://www.disprot.org/DP00086r026

3.5k protein regions

0.5-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/Tools/hmmer/search/phmmer

Result of searches are annotated (results last 1 week)

0.1
View example page Page
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/Tools/hmmer/search/phmmer

Result of searches are annotated (results last 1 week)

0.1
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http://www.ebi.ac.uk/pdbe/entry/pdb/4a7l

Over 175,000 protein structures

0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://www.ebi.ac.uk/biosamples/samples/SAMEA491372

Over 16 million samples

0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://www.disprot.org/DP00086r026

3.5k protein regions

0.1-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://ega-archive.org/studies/EGAS00000000001

Over 3,700 studies

0.1
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Retrieve using Bioschemas Scraping service BMUSE
https://pippa.psb.ugent.be/pippa_experiments/consult_experiment_basic_info/55
0.2-DRAFT
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Retrieve using Bioschemas Scraping service BMUSE
https://corkoakdb.org/gene/13014
0.6
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Retrieve using Bioschemas Scraping service BMUSE
https://www.gbif.org/species/5220113

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

0.7-DRAFT
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://inpn.mnhn.fr/espece/cd_nom/60878/

180,000+ species have been annotated

0.7-DRAFT
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://www.opalesurfcasting.net/connaissances/faune-et-flore/le-saumon-de-l-atlantique-salmo-salar.html
0.4-DRAFT
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://pippa.psb.ugent.be/pippa_experiments/consult_experiment_basic_info/55
0.6
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://scholia.toolforge.org/taxon/Q15978631

More than 2.9M pages annotated with Taxon.

0.6
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://www.gbif.org/species/5220113

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

0.1-DRAFT
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://inpn.mnhn.fr/espece/cd_nom/60878/

180,000+ species have been annotated

0.1-DRAFT
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
https://bioschemas.org/tutorials/what_why_bioschemas
0.9
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE

54 ELIXIR resources have Bioschemas markup. Of which there are

  • 11 ELIXIR Core Data Resource (CDR)
  • 3 ELIXIR Deposition Database Resource (DDR)
  • 6 ELIXIR Recommended Interoperability Resource (RIR)
Profiles: 2
AIP Mutation Database

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
Alliance of Genome Resources

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.5)

Provides MGI, FlyBase, RGD, WormBase, SGD and Zfin. Release 2.2.0 contains 276,945 Gene records.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
BAR 3.0

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Biological Magnetic Resonance Data Bank (BMRB)
  • Description: A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules

Implemented Profiles

Dataset (v0.3-RELEASE)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
COSMIC Gene at Sanger

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Cscan

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
DataMed

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
DEB Register

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Galaxy Project

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Gigadb

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
Global Biodiversity Information Facility (GBIF)

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.7-DRAFT)

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
TaxonName (v0.1-DRAFT)

3 million+ taxon pages in the GBIF Backbone taxonomy annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Human Pluripotent Stem Cell Registry (hPSCreg)
  • Description: hPSCreg offers the research community, legislators, regulators and the general public at large an in-depth overview on the current status of human pluripotent stem cell (hPSC) research.
  • Sitemap: https://hpscreg.eu/sitemap.xml

Implemented Profiles

BioSample (v0.1-DRAFT)

Over 3,500 cell lines

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
International Microvillus Inclusion Disease (MVID) Patient Registry

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Pscan

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
PscanChIP

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 4
Scholia
  • Description: Scholia is a service that creates visual scholarly profiles for topic, people, organizations, species, chemicals, etc using bibliographic and other information in Wikidata.

Implemented Profiles

Gene (v0.7)

Over 40,000 genes.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.5)

More than 1.2M pages annotated with chemical compounds. Live statistics from https://scholia.toolforge.org/chemical/.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

More than 100,000 proteins.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)

More than 2.9M pages annotated with Taxon.

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
bio.tools
  • Nodes: DK, FR, ES

Implemented Profiles

ComputationalTool (v0.4-DRAFT)

17,090 tools

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Bioschemas
  • Nodes: UK, BE, CH, EBI, ES, FR, Hub, IT, NL, NO, PT, SE

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
PIPPA: PSB Interface for Plant Phenotype Analysis
  • Nodes: BE

Implemented Profiles

Study (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
ENZYME - The Enzyme Data Bank
  • Nodes: CH

Implemented Profiles

Dataset (v0.1)

4450 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
HAMAP
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
ModelArchive
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
PROSITE - Protein domains, families and functional sites description

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
SIB
  • Nodes: CH

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
STRING
  • Keywords: CDR
  • Nodes: CH

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.9-DRAFT)

25 million+ protein networks

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
SWISS-MODEL

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)

12 Datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
UniProt

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
MassBank Europe

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
Biosamples

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Sample (v0.1)

Over 16 million samples

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
ChEMBL
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
COVID-19 Data Portal

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
EGA

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

Over 5,300 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Study (v0.1)

Over 3,700 studies

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 4
Ensembl Genome Browser
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

DataCatalog (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
HmmerWeb
  • Nodes: EBI

Implemented Profiles

Protein (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinAnnotation (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinStructure (v0.1)

Result of searches are annotated (results last 1 week)

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Identifiers.org
  • Keywords: RIR
  • Nodes: EBI

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
OmicsDI
  • Keywords: RIR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.1)

Over 150,000 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
PDBe

Implemented Profiles

Protein (v0.1)

Over 215,000 proteins

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinStructure (v0.1)

Over 175,000 protein structures

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Reactome
  • Keywords: CDR
  • Nodes: EBI

Implemented Profiles

Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
French Institute of Bioinformatics (IFB)

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
iPPI-DB

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.5)

2,035 compounds

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
National Museum of Natural History of Paris
  • Nodes: FR

Implemented Profiles

Taxon (v0.7-DRAFT)

180,000+ species have been annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
TaxonName (v0.1-DRAFT)

180,000+ species have been annotated

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
opalesurfcasting.net
  • Nodes: FR

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Orphanet

Implemented Profiles

Disease (v0.1-DRAFT)

Over 6,000 diseases

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
ELIXIR
  • Nodes: Hub

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 6
DisProt
  • Description: DisProt is a database of intrinsically disordered proteins. Disordered regions are manually curated from literature. DisProt annotations cover both structural and functional aspects of disorder detected by specific experimental methods. Annotation concepts and detection methods are encoded in the Disorder Ontology.
  • Sitemap: https://disprot.org/sitemap.xml
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2-DRAFT)

1.6k data records

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

1.6k proteins

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
ProteinAnnotation (v0.5-DRAFT)

3.5k protein regions

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
SequenceRange (v0.1-DRAFT)

3.5k protein regions

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
eDGAR
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)

3,658 genes

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
ITSoneDB
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
MobiDB

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.2)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
PhenPath
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
The Molecular INTeraction Database (MINT)
  • Keywords: CDR
  • Nodes: IT

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
IMI Data Catalog
  • Nodes: LU

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.4-DRAFT)

Over 200 datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
BridgeDb

Implemented Profiles

Dataset (v0.4-DRAFT)

23 identifier mapping databases for genes, proteins, complexes, metabolites, and more

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
CHD7 Database
  • Nodes: NL

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
NanoCommons

Implemented Profiles

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
Paired Omics Data Platform

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

71 Datasets

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
WikiPathways

Implemented Profiles

Dataset (v0.4-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
CorkOakDB
  • Nodes: PT

Implemented Profiles

Gene (v0.7)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Taxon (v0.6)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
ELIXIR Portugal
  • Nodes: PT

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Human Protein Atlas
  • Keywords: CDR
  • Nodes: SE

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
Birmingham Metabolomics Training Centre
  • Nodes: UK

Implemented Profiles

Event (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
CATH-Gene3D
  • Keywords: CDR
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
ELIXIR TeSS

Implemented Profiles

Event (v0.1)

Over 12,000 events

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
FAIRsharing
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.1)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
FlyMine
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 3
HUGO Gene Nomenclature Committee
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Gene (v0.7)

Over 44,000 genes

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Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 1
HumanMine
  • Keywords: RIR
  • Nodes: UK

Implemented Profiles

Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 4
IUPHAR/BPS Guide to Pharmacology
  • Nodes: UK

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
MolecularEntity (v0.2-DRAFT)

Over 9,800 ligands

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Protein (v0.11)

Proteins associated with COVID-19

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 2
PCDDB

Implemented Profiles

DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)

653 datasets as of May 2020

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Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 4
SynBioHub
  • Nodes: UK

Implemented Profiles

BioChemEntity (v0.7-RC)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataRecord (v0.2-DRAFT)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Dataset (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Profiles: 4
WorkflowHub
  • Nodes: UK

Implemented Profiles

ComputationalWorkflow (v1.0-RELEASE)

Over 100 workflows

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Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
DataCatalog (v0.3)
View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
FormalParameter (v1.0-RELEASE)

Over 100 workflows

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Person (v0.2-DRAFT)

Over 100 people

View example page Page
Visualise on the Schema.org Markup Validation Tool (SMV) SMV
Retrieve using Bioschemas Scraping service BMUSE
Note:

As we do not maintain the websites listed above we can not guarantee the list is up to date, the sites are live and feature appropriate content or the links work.

Help us keep it updated: Join the community and/or create a pull request on the Bioschemas GitHub community project.

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